Si Y, Roberts K. Deep Patient Representation of Clinical Notes at Intensive Care Unit for Multi-Task Prediction. AMIA 2019 Informatics Summit. Accepted.
 Si Y, Roberts K. A Frame-Based NLP System for Cancer-Related Information Extraction. In AMIA Annual Symposium Proceedings 2018. American Medical Informatics Association, Nov 2-7 2018.
 Roberts K, Si Y, Gandhi A, and Bernstam E. A FrameNet for Cancer Information in Clinical Narratives: Schema and Annotation. In Proceedings of the Eleventh International Conference on Language Resources and Evaluation (LREC2018). European Language Resources Association (ELRA), May 7-12 2018.
 Si Y, Weng C. An OMOP CDM-based Relational Database of Clinical Research Eligibility Criteria. Studies in health technology and informatics. 2017;245:950.
 Butler A, Wei W, Yuan C, Kang T, Si Y, Weng C. The Data Gap in the EHR for Clinical Research Eligibility Screening. AMIA Summits on Translational Science Proceedings. 2018;2017:320.
 Han B, Long W, He J, Liu Y, Si Y, Tian L. Effects of dietary Bacillus licheniformis on growth performance, immunological parameters, intestinal morphology and resistance of juvenile Nile tilapia (Oreochromis niloticus) to challenge infections. Fish & shellfish immunology. 2015 Oct 1;46(2):225-31.